[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 43 items for (author: meir & a)

EMDB-19008:
Cryo-EM structure of the human mPSF with PAPOA C-terminus peptide (PAPOAc)
Method: single particle / : Todesca S, Sandmeir F, Keidel A, Conti E

PDB-8r8r:
Cryo-EM structure of the human mPSF with PAPOA C-terminus peptide (PAPOAc)
Method: single particle / : Todesca S, Sandmeir F, Keidel A, Conti E

EMDB-36138:
CrtSPARTA Octamer bound with guide-target
Method: single particle / : Guo LJ, Huang PP, Li ZX, Xiao YB, Chen MR

PDB-8jay:
CrtSPARTA Octamer bound with guide-target
Method: single particle / : Guo LJ, Huang PP, Li ZX, Xiao YB, Chen MR

EMDB-36059:
Short ago complexed with TIR-APAZ
Method: single particle / : Guo LJ, Huang PP, Li ZX, Xiao YB, Chen MR

PDB-8j84:
Short ago complexed with TIR-APAZ
Method: single particle / : Guo LJ, Huang PP, Li ZX, Xiao YB, Chen MR

EMDB-36070:
SPARTA monomer bound with guide-target, state 2
Method: single particle / : Li ZX, Guo LJ, Huang PP, Xiao YB, Chen MR

EMDB-36095:
CrtSPARTA hetero-dimer bound with guide-target, state 1
Method: single particle / : Li ZX, Guo LJ, Huang PP, Xiao YB, Chen MR

EMDB-36114:
SPARTA dimer bound with guide-target
Method: single particle / : Li ZX, Guo LJ, Huang PP, Xiao YB, Chen MR

PDB-8j8h:
SPARTA monomer bound with guide-target, state 2
Method: single particle / : Li ZX, Guo LJ, Huang PP, Xiao YB, Chen MR

PDB-8j9g:
CrtSPARTA hetero-dimer bound with guide-target, state 1
Method: single particle / : Li ZX, Guo LJ, Huang PP, Xiao YB, Chen MR

PDB-8j9p:
SPARTA dimer bound with guide-target
Method: single particle / : Li ZX, Guo LJ, Huang PP, Xiao YB, Chen MR

EMDB-28013:
Cryo-EM structure of the Glutaminase C core filament (fGAC)
Method: single particle / : Ambrosio AL, Dias SM, Quesnay JE, Portugal RV, Cassago A, van Heel MG, Islam Z, Rodrigues CT

PDB-8ec6:
Cryo-EM structure of the Glutaminase C core filament (fGAC)
Method: single particle / : Ambrosio AL, Dias SM, Quesnay JE, Portugal RV, Cassago A, van Heel MG, Islam Z, Rodrigues CT

EMDB-16144:
Structure of the SARS-CoV-2 spike glycoprotein in complex with the macrocyclic peptide S1B3inL1
Method: single particle / : Hurdiss DL, Drulyte I

PDB-8bon:
Structure of the SARS-CoV-2 spike glycoprotein in complex with the macrocyclic peptide S1B3inL1
Method: single particle / : Hurdiss DL

EMDB-28961:
Cryo-EM structure of the human BCDX2 complex
Method: single particle / : Jia L, Wasmuth EV, Ruben EA, Sung P, Rawal Y, Greene EC, Meir A, Olsen SK

EMDB-29917:
Cryo-EM structure of a human BCDX2/ssDNA complex
Method: single particle / : Jia L, Wasmuth EV, Ruben EA, Sung P, Rawal Y, Greene EC, Meir A, Olsen SK

PDB-8faz:
Cryo-EM structure of the human BCDX2 complex
Method: single particle / : Jia L, Wasmuth EV, Ruben EA, Sung P, Rawal Y, Greene EC, Meir A, Olsen SK

PDB-8gbj:
Cryo-EM structure of a human BCDX2/ssDNA complex
Method: single particle / : Jia L, Wasmuth EV, Ruben EA, Sung P, Rawal Y, Greene EC, Meir A, Olsen SK

EMDB-15860:
Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

PDB-8b5l:
Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

EMDB-15863:
Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

PDB-8b6c:
Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

EMDB-14582:
Human heparan sulfate polymerase complex EXT1-EXT2
Method: single particle / : Leisico F, Omeiri J, Hons M, Schoehn G, Lortat-Jacob H, Wild R

PDB-7zay:
Human heparan sulfate polymerase complex EXT1-EXT2
Method: single particle / : Leisico F, Omeiri J, Hons M, Schoehn G, Lortat-Jacob H, Wild R

EMDB-14867:
Dimeric PSI of Chlamydomonas reinhardtii at 2.74 A resolution (symmetry expanded)
Method: single particle / : Naschberger A, Amunts A

EMDB-14870:
Monomeric PSI of Chlamydomonas reinhardtii at 2.31 A resolution
Method: single particle / : Naschberger A, Amunts A

EMDB-14871:
Dimeric PSI of Chlamydomonas reinhardtii at 2.97 A resolution
Method: single particle / : Naschberger A, Amunts A

EMDB-14872:
Plastocyanin bound to PSI of Chlamydomonas reinhardtii
Method: single particle / : Naschberger A, Amunts A

PDB-7zq9:
Dimeric PSI of Chlamydomonas reinhardtii at 2.74 A resolution (symmetry expanded)
Method: single particle / : Naschberger A, Amunts A

PDB-7zqc:
Monomeric PSI of Chlamydomonas reinhardtii at 2.31 A resolution
Method: single particle / : Naschberger A, Amunts A

PDB-7zqd:
Dimeric PSI of Chlamydomonas reinhardtii at 2.97 A resolution
Method: single particle / : Naschberger A, Amunts A

PDB-7zqe:
Plastocyanin bound to PSI of Chlamydomonas reinhardtii
Method: single particle / : Naschberger A, Amunts A

EMDB-14185:
Human RBBP6-bound CPSF complex
Method: single particle / : Sandmeir F, Conti E

EMDB-25164:
Cryo-EM structure of AdnA-AdnB(W325A) in complex with DNA and AMPPNP
Method: single particle / : Wang J, Warren GM, Shuman S, Patel DJ

PDB-7sjr:
Cryo-EM structure of AdnA-AdnB(W325A) in complex with DNA and AMPPNP
Method: single particle / : Wang J, Warren GM, Shuman S, Patel DJ

EMDB-13083:
L. pneumophila Type IV Coupling Complex (T4CC) with density for DotY N-terminal and middle domains
Method: single particle / : Mace K, Meir A, Lukoyanova N, Waksman G

EMDB-13858:
L. pneumophila Type IV Coupling Complex (T4CC) computed from WT particles where DotY/Z is missing (referred to as T4CCWTminusYZ at 6.3A)
Method: single particle / : Mace K, Meir A, Lukoyanova N, Waksman G

EMDB-13859:
L. pneumophila Type IV Coupling Complex (T4CC) computed from a sample where dotY/Z genes were deleted (referred to as T4CCdeltaDotYZ at 15A)
Method: single particle / : Mace K, Meir A, Lukoyanova N, Waksman G

PDB-7ovb:
L. pneumophila Type IV Coupling Complex (T4CC) with density for DotY N-terminal and middle domains
Method: single particle / : Mace K, Meir A, Lukoyanova N, Waksman G

EMDB-10350:
Type IV Coupling Complex (T4CC) from L. pneumophila.
Method: single particle / : Mace K, Meir A, Lukoyanova N, Waksman G

PDB-6sz9:
Type IV Coupling Complex (T4CC) from L. pneumophila.
Method: single particle / : Mace K, Meir A, Lukoyanova N, Waksman G

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more